NEWS

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SpatialData.plot 0.99.12

• remove 'inst/extdata/' in favor of 'spatialdataR'
• expand README with image & brief textual description

SpatialData.plot 0.99.11

• documentation revision
• fix unit tests according to knew 'plotShape()' capabilities
• bug fix: 'plotShape()' now respects 'as' when shapes are circles

SpatialData.plot 0.99.10

• bug fix in plotFrame() to pass non-valid names as aesthetics (e.g., "mt-Co1")

SpatialData.plot 0.99.9

• add scalebar() example to vignette
• scalebar() support for points/shapes
• infer coordinate system from layer if unspecified
• add 'as' argument to plotShape() to plot either border, centroid or solid shapes
• inform about automatically selected coordinate system in plot functions

SpatialData.plot 0.99.8

• interface revision: 'plotImage/Label/Frame' inherit object and coordinate system from 'plotSpatialData'

SpatialData.plot 0.99.7

• added 'scalebar' display
• near-comprehensive unit testing
• default to random label coloring by instance
• multi-scale adjustment (= mapping to physical space)
• address R CMD check notes/warnings toward Bioc submission
• support for 3D (z) and 4D (t) through slicing or max-projection
• drop various code bits in favor of new 'spatialdataR' functionality

SpatialData.plot 0.99.6

• renaming of 'SpatialData' classes
• improved visualization of labels
• fixed auto-contrasting for HnE images
• fixed channel-merging for multi-plex images

SpatialData.plot 0.99.5

• fix visualization of circles

SpatialData.plot 0.99.4

• bump R version dependecy
• make use of some newly implemented SD utilities
• rewrite of image visualization (speedup, auto-contrasting)

SpatialData.plot 0.99.3

• in 'plotImage', render discrete color legend for multi-channel (non-RGB) images

SpatialData.plot 0.99.2

• in 'plotImage', added support to visualize channels of choice, as well as 'cl' argument to control constrast limits
• updated vignette to include corresponding examples

SpatialData.plot 0.99.1

• various fixes related to moving 'instance/region_key' to 'int_colData'
• added examples of 'mask'ing in the vignette

SpatialData.plot 0.99.0

• initialization of 'SpatialData.plot' package