{ "_id": "6a1f0d04b401979e7341cf55", "Package": "remart", "Title": "Reimplementation of the 'biomaRt' Package Using Modern Ensembl\nAPIs", "Version": "0.0.0.9000", "Authors@R": "c(\nperson(\"Hugo\", \"Gruson\", , \"hugo.gruson@embl.de\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4094-1476\")),\nperson(\"German Network for Bioinformatics Infrastructure - de.NBI\", role = \"fnd\")\n)", "Description": "This package aims to offer a drop-in replacement to\nbiomaRt using the same interface but the more modern and better\nmaintained APIs provided by Ensembl.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "URL": "https://huber-group-embl.github.io/remart/,\nhttps://github.com/Huber-group-EMBL/remart", "BugReports": "https://github.com/Huber-group-EMBL/remart/issues", "Config/pak/sysreqs": "libssl-dev", "Repository": "https://bisaloo.r-universe.dev", "Date/Publication": "2026-04-08 13:51:09 UTC", "RemoteUrl": "https://github.com/Huber-group-EMBL/remart", "RemoteRef": "HEAD", "RemoteSha": "18249389aad2109e82cbc02769c53f1ef421ba28", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-17 09:16:30 UTC", "User": "root" }, "Author": "Hugo Gruson [aut, cre] (ORCID: ),\nGerman Network for Bioinformatics Infrastructure - de.NBI [fnd]", "Maintainer": "Hugo Gruson ", "MD5sum": "6b51e6d79d4c7be0b8910dc4b1a2558c", "_user": "bisaloo", "_type": "src", "_file": "remart_0.0.0.9000.tar.gz", "_fileid": "ec957dea769c0104dce5cb4438b3b8c1351f62201f92b01cd081c1b379a8ef9b", "_filesize": 174022, "_sha256": "ec957dea769c0104dce5cb4438b3b8c1351f62201f92b01cd081c1b379a8ef9b", "_created": "2026-05-17T09:16:30.000Z", "_published": "2026-06-02T17:04:04.015Z", "_distro": "noble", "_jobs": [ { "job": 79127407704, "time": 170, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7041160180" }, { "job": 79127407706, "time": 197, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7041162992" }, { "job": 79127408438, "time": 120, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7041155143" }, { "job": 79127407403, "time": 158, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7041159110" }, { "job": 79127407156, "time": 174, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7041142052" }, { "job": 79127406900, "time": 101, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7364559701" }, { "job": 79127407901, "time": 132, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7041156297" }, { "job": 79127408461, "time": 119, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7041154910" }, { "job": 79127407686, "time": 102, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7041153169" } ], "_buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/Huber-group-EMBL/remart", "_commit": { "id": "18249389aad2109e82cbc02769c53f1ef421ba28", "author": "Hugo Gruson ", "committer": "Hugo Gruson ", "message": "Add GitHub links\n", "time": 1775656269 }, "_maintainer": { "name": "Hugo Gruson", "email": "hugo.gruson@embl.de", "login": "bisaloo", "mastodon": "@grusonh@mastodon.social", "orcid": "0000-0002-4094-1476", "description": "Evolutionary Biologist turned Research Software Engineer in R.", "uuid": 10783929 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2.0", "role": "Depends" }, { "package": "httr2", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "huber-group-embl", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-03", "n": 1 }, { "week": "2026-11", "n": 10 }, { "week": "2026-12", "n": 2 }, { "week": "2026-13", "n": 3 }, { "week": "2026-15", "n": 3 } ], "_tags": [], "_stars": 3, "_contributors": [ { "user": "bisaloo", "count": 19, "uuid": 10783929 } ], "_userbio": { "uuid": 10783929, "type": "user", "name": "Hugo Gruson", "description": "Evolutionary Biologist turned Research Software Engineer in R." }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/remart" }, "_devurl": "https://github.com/huber-group-embl/remart", "_pkgdown": "https://huber-group-embl.github.io/remart/", "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/remart.html", "manual.pdf" ], "_cranurl": false, "_exports": [ "getGene", "getSequence" ], "_help": [ { "page": "getGene", "title": "Retries gene annotation information from Ensembl.", "topics": [ "getGene" ] }, { "page": "getSequence", "title": "Get Sequences from Ensembl", "topics": [ "getSequence" ] } ], "_readme": "https://github.com/Huber-group-EMBL/remart/raw/HEAD/README.md", "_rundeps": [ "askpass", "cli", "curl", "glue", "httr2", "lifecycle", "magrittr", "openssl", "R6", "rappdirs", "rlang", "sys", "vctrs", "withr" ], "_vignettes": [ { "source": "design.Rmd", "filename": "design.html", "title": "design", "engine": "knitr::rmarkdown", "headings": [ "Function names, signatures, and return values", "FAQ", "Why a new package?" ], "created": "2026-03-13 19:15:29", "modified": "2026-03-13 19:15:29", "commits": 1 } ], "_score": 3.8750612633917, "_indexed": false, "_nocasepkg": "remart", "_universes": [ "bisaloo" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.0.0.9000", "date": "2026-05-17T09:18:36.000Z", "distro": "noble", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "4e02a8334917e9d1454018efd36ba6da5099ed052bfcdcc36e9a829bed1895b2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.6.0", "os": "linux", "version": "0.0.0.9000", "date": "2026-05-17T09:19:11.000Z", "distro": "noble", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "b586017ccd508905690a8086863b7ef2637aa5dc0d8e7beeb30f5da614cae5f9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.5.3", "os": "mac", "version": "0.0.0.9000", "date": "2026-05-17T09:18:02.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "fbc6e76ecd9ae31cb7e309ec59dfb6c327f89f741fb3618505c710209210b777", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.6.0", "os": "mac", "version": "0.0.0.9000", "date": "2026-05-17T09:18:28.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "2961969cacfefc9bd78977934639f420d1cf260ec04385c0b516660654706807", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.7.0", "os": "win", "version": "0.0.0.9000", "date": "2026-05-17T09:17:51.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "c198d4a1002fd3941381353c9d5c5c6ba239def5610d625f3928886133d60566", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.5.3", "os": "win", "version": "0.0.0.9000", "date": "2026-05-17T09:17:37.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "f66086487a734d774839be297b3513801a7b579cf7cc92ddd91b139309803f93", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.6.0", "os": "win", "version": "0.0.0.9000", "date": "2026-05-17T09:17:40.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "a02f89558b01725722d72f08a89307c3933c3ecca11e9095c135866f18c80963", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" }, { "r": "4.6.0", "os": "wasm", "version": "0.0.0.9000", "date": "2026-06-02T17:03:43.000Z", "commit": "18249389aad2109e82cbc02769c53f1ef421ba28", "fileid": "4fac12745e65fecd6bd755a66cd8f96f4004eb4068bda8f39d34af73bdf440c1", "status": "success", "buildurl": "https://github.com/r-universe/bisaloo/actions/runs/25986806036" } ] }