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  "Title": "Social Mixing Matrices for Infectious Disease Modelling",
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  "Description": "Methods for sampling contact matrices from diary data for\nuse in infectious disease modelling, as discussed in Mossong et\nal. (2008) <doi:10.1371/journal.pmed.0050074>.",
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  "Date/Publication": "2026-09-28 19:07:59 UTC",
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    "limits_to_agegroups",
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    "rebin_ages",
    "reduce_age_groups",
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    "survey_countries",
    "survey_country_population",
    "symmetrise",
    "weigh",
    "weigh_by_age",
    "weigh_by_dayofweek",
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      "table": false,
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      "topics": [
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    },
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      "topics": [
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    {
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      "title": "Check contact survey data",
      "topics": [
        "as_contact_survey"
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    {
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      "topics": [
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      "topics": [
        "check",
        "check.contact_survey"
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    },
    {
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      "topics": [
        "clean",
        "clean.contact_survey"
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        "compute_matrix"
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    {
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      "title": "Generate a contact matrix from diary survey data",
      "topics": [
        "contact_matrix"
      ]
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      "topics": [
        "download_survey"
      ]
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        "flatten"
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        "get_survey"
      ]
    },
    {
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      "topics": [
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      ]
    },
    {
      "page": "list_surveys",
      "title": "List all surveys available for download",
      "topics": [
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      ]
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    },
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      "topics": [
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      "topics": [
        "survey"
      ]
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      "title": "List all countries contained in a survey",
      "topics": [
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        "weigh_by_age",
        "weigh_by_dayofweek"
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      ]
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      "title": "Introduction to socialmixr",
      "author": "Sebastian Funk",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "The pipeline workflow",
        "Assigning age groups",
        "Surveys",
        "A note on truncated surveys",
        "Bootstrapping",
        "Demography",
        "When your population is coarser than your age groups",
        "Symmetric contact matrices",
        "Contact rates per capita",
        "Splitting contact matrices",
        "Filtering",
        "Participant weights",
        "Temporal aspects and demography",
        "User-defined participant weights",
        "Weight threshold",
        "Numerical example",
        "Get survey data",
        "Weight by day of week",
        "Weight by age",
        "Apply threshold",
        "Plotting",
        "Using ggplot2",
        "Using R base",
        "References"
      ],
      "created": "2022-06-16 11:43:40",
      "modified": "2026-09-28 19:07:59",
      "commits": 37
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