Reading HDF5 Files In The CloudUpdated 9 days ago

Mike L. Smith

Rendered from rhdf5_cloud_reading.Rmd in rhdf5 2.57.1.
Supported Zarr features in RarrUpdated 9 days ago

Hugo Gruson

Rendered from features.Rmd in Rarr 2.1.17.
Supported Zarr features in RarrUpdated 9 days ago

Hugo Gruson

Rendered from features.Rmd in Rarr 2.1.17.
Getting started with grumpyUpdated 11 days ago

Hugo Gruson

Rendered from grumpy.qmd in grumpy 0.1.1.9000.
Supported featuresUpdated 11 days ago

Hugo Gruson

Rendered from features.qmd in grumpy 0.1.1.9000.
Design principlesUpdated 11 days ago

Hugo Gruson

Rendered from design.qmd in grumpy 0.1.1.9000.
Design principlesUpdated 16 days ago

Hugo Gruson

Rendered from design.Rmd in grumpy 0.1.1.
Getting started with grumpyUpdated 16 days ago

Hugo Gruson

Rendered from grumpy.Rmd in grumpy 0.1.1.
Introduction to socialmixrUpdated 24 days ago

Sebastian Funk

Rendered from socialmixr.Rmd in socialmixr 0.6.0.9000.
Getting Started with Epinowcast: NowcastingUpdated 30 days ago

Epinowcast Team

Rendered from epinowcast.Rmd in epinowcast 0.6.0.1000.
Temporal aggregation guideUpdated 30 days ago

Epinowcast Team

Rendered from temporal-aggregation.Rmd in epinowcast 0.6.0.1000.
Visualising Preprocessed DataUpdated 30 days ago

Epinowcast Team

Rendered from preprocess-visualisation.Rmd in epinowcast 0.6.0.1000.
Model Features SummaryUpdated 1 months ago

Epinowcast Team

Rendered from features.Rmd in epinowcast 0.6.0.1000.
Comparing Inference MethodsUpdated 1 months ago

Epinowcast Team

Rendered from inference-methods.Rmd in epinowcast 0.6.0.1000.
Estimating the effective reproduction number in real-time for a single timeseries with reporting delaysUpdated 1 months ago

Epinowcast Team

Rendered from single-timeseries-rt-estimation.Rmd in epinowcast 0.6.0.1000.
Design principles for the Rarr packageUpdated 2 months ago

Hugo Gruson

Rendered from design.Rmd in Rarr 2.1.17.
Design principles for the Rarr packageUpdated 2 months ago

Hugo Gruson

Rendered from design.Rmd in Rarr 2.1.17.
Inferring differential exon usage in RNA-Seq data with the DEXSeq packageUpdated 2 months ago

Alejandro Reyes, Simon Anders, Wolfgang Huber

Rendered from DEXSeq.Rmd in DEXSeq 1.59.0.
ZarrArray overviewUpdated 2 months ago

Hervé Pagès

Rendered from ZarrArray_overview.Rmd in ZarrArray 1.1.0.
Resources to help with model fitting using StanUpdated 2 months ago

Epinowcast Team

Rendered from stan-help.Rmd in epinowcast 0.6.0.1000.
Scoring rules in scoringutilsUpdated 2 months ago

Nikos Bosse

Rendered from scoring-rules.Rmd in scoringutils 2.2.0.9000.
Parallelize Computation of Indices Updated 2 months ago

Matthias Grenié

Rendered from fundiversity_1-parallel.Rmd in fundiversity 1.1.1.9000.
Performance Benchmark with other packages Updated 2 months ago

Matthias Grenié

Rendered from fundiversity_2-performance.Rmd in fundiversity 1.1.1.9000.
Introduction: microarray quality assessment with arrayQualityMetricsUpdated 2 months ago

Audrey Kauffmann, Wolfgang Huber

Rendered from arrayQualityMetrics.Rmd in arrayQualityMetrics 3.69.1.
Advanced topics: Customizing arrayQualityMetrics reports and programmatic processing of the outputUpdated 2 months ago

Audrey Kauffmann, Wolfgang Huber

Rendered from aqm.Rmd in arrayQualityMetrics 3.69.1.
Working with Zarr arrays in RUpdated 3 months ago

Mike L. Smith

Rendered from Rarr.Rmd in Rarr 2.1.17.
Working with Zarr arrays in RUpdated 3 months ago

Mike L. Smith

Rendered from Rarr.Rmd in Rarr 2.1.17.
Linking to Rhdf5libUpdated 3 months ago

Mike L. Smith

Rendered from Rhdf5lib.Rmd in Rhdf5lib 2.1.0.
designUpdated 3 months ago

Hugo Gruson

Rendered from design.Rmd in remart 0.0.0.9000.
Scoring multivariate forecastsUpdated 3 months ago

Nikos Bosse

Rendered from scoring-multivariate-forecasts.Rmd in scoringutils 2.2.0.9000.
rhdf5 Practical TipsUpdated 4 months ago

Mike L. Smith

Rendered from practical_tips.Rmd in rhdf5 2.57.1.
Hierarchical nowcasting of age stratified COVID-19 hospitalisations in GermanyUpdated 4 months ago

Epinowcast Team

Rendered from germany-age-stratified-nowcasting.Rmd in epinowcast 0.6.0.1000.
Model definition and implementationUpdated 4 months ago

Epinowcast Team

Rendered from model.Rmd in epinowcast 0.6.0.1000.
Case studiesUpdated 4 months ago

Sam Abbott

Rendered from package-use-cases.Rmd in epinowcast 0.6.0.1000.
rhdf5 - HDF5 interface for RUpdated 7 months ago

Bernd Fischer, Mike L. Smith

Rendered from rhdf5.Rmd in rhdf5 2.57.1.
Using a BioMart other than EnsemblUpdated 8 months ago

Steffen Durinck, Wolfgang Huber, Mike Smith

Rendered from accessing_other_marts.Rmd in biomaRt 2.69.0.
Accessing Ensembl annotation with biomaRtUpdated 8 months ago

Mike L. Smith, Steffen Durinck, Wolfgang Huber

Rendered from accessing_ensembl.Rmd in biomaRt 2.69.0.
Design principles for pkgiconUpdated 9 months ago

Hugo Gruson

Rendered from design.Rmd in pkgicon 0.0.0.9000.
Frequently Asked QuestionsUpdated 10 months ago

Hugo Gruson

Rendered from FAQ.Rmd in simpleMH 0.1.1.9000.
Design Principles for lightrUpdated 10 months ago

Hugo Gruson

Rendered from design-principles.Rmd in lightr 2.0.0.
Renormalise spectral data with a custom referenceUpdated 10 months ago

Hugo Gruson

Rendered from renormalise.Rmd in lightr 2.0.0.
Design Principles for lightrUpdated 10 months ago

Hugo Gruson

Rendered from design-principles.Rmd in lightr 2.0.0.
Renormalise spectral data with a custom referenceUpdated 10 months ago

Hugo Gruson

Rendered from renormalise.Rmd in lightr 2.0.0.
Interaction of mcmcensemble with other packages for MCMC diagnostic and plottingUpdated 11 months ago

Hugo Gruson

Rendered from diagnostic-pkgs.Rmd in mcmcensemble 3.2.0.9000.
Frequently Asked QuestionsUpdated 11 months ago

Hugo Gruson

Rendered from faq.Rmd in mcmcensemble 3.2.0.9000.
Batch import with lr_get_spec() and lr_get_metadata()Updated 11 months ago

Hugo Gruson

Rendered from batch_import.Rmd in lightr 2.0.0.
Real life exampleUpdated 11 months ago

Hugo Gruson

Rendered from true_example.Rmd in lightr 2.0.0.
Batch import with lr_get_spec() and lr_get_metadata()Updated 11 months ago

Hugo Gruson

Rendered from batch_import.Rmd in lightr 2.0.0.
Real life exampleUpdated 11 months ago

Hugo Gruson

Rendered from true_example.Rmd in lightr 2.0.0.
Design Principles for authoritativeUpdated 12 months ago

Hugo Gruson

Rendered from design-principles.Rmd in authoritative 0.2.0.9000.
Get started with authoritativeUpdated 12 months ago

Hugo Gruson

Rendered from authoritative.Rmd in authoritative 0.2.0.9000.
Software permissions and regulationsUpdated 1 years ago

Chris Hartgerink

Rendered from software-permissions.Rmd in linelist 2.0.1.9000.
An introduction to linelistUpdated 1 years ago

Chris Hartgerink

Rendered from linelist.Rmd in linelist 2.0.1.9000.
Compatibility with dplyrUpdated 1 years ago

Chris Hartgerink

Rendered from compat-dplyr.Rmd in linelist 2.0.1.9000.
Design Principles for linelistUpdated 2 years ago

Chris Hartgerink

Rendered from design-principles.Rmd in linelist 2.0.1.9000.
HDF5 Compression FiltersUpdated 2 years ago

Mike L. Smith

Rendered from rhdf5filters.Rmd in rhdf5filters 1.25.0.
Overview of how to use fundiversity Updated 2 years ago

Matthias Grenié

Rendered from fundiversity.Rmd in fundiversity 1.1.1.9000.
Discretised distributionsUpdated 2 years ago

Epinowcast Team

Rendered from distributions.Rmd in epinowcast 0.6.0.1000.
List of included regionsUpdated 3 years ago

Hugo Gruson

Rendered from countries.Rmd in contactdata 1.1.0.9000.
List of included regionsUpdated 3 years ago

Hugo Gruson

Rendered from countries.Rmd in contactdata 1.1.0.9000.
Visualise age pyramidsUpdated 3 years ago

Hugo Gruson

Rendered from visualise_age.Rmd in contactdata 1.1.0.9000.
Visualise contact matricesUpdated 3 years ago

Hugo Gruson

Rendered from visualise_contact.Rmd in contactdata 1.1.0.9000.
Visualise age pyramidsUpdated 3 years ago

Hugo Gruson

Rendered from visualise_age.Rmd in contactdata 1.1.0.9000.
Visualise contact matricesUpdated 3 years ago

Hugo Gruson

Rendered from visualise_contact.Rmd in contactdata 1.1.0.9000.
Design decisionsUpdated 3 years ago

Hugo Gruson

Rendered from design.Rmd in xlcutter 0.1.1.9000.
Check Numerical Correctness of Indices Updated 3 years ago

Matthias Grenié

Rendered from fundiversity_3-correctness.Rmd in fundiversity 1.1.1.9000.
Design Principles for fundiversity Updated 4 years ago

Matthias Grenié

Rendered from fundiversity_4-design-principles.Rmd in fundiversity 1.1.1.9000.
Introduction to pavoUpdated 5 years ago

Rafael Maia, Thomas White, Hugo Gruson, John Endler, Pierre-Paul Bitton, Chad Eliason

Rendered from pavo.Rmd in pavo 2.10.0.