Package: linelist 1.1.4.9000

linelist: Tagging and Validating Epidemiological Data

Provides tools to help storing and handling case line list data. The 'linelist' class adds a tagging system to classical 'data.frame' objects to identify key epidemiological data such as dates of symptom onset, epidemiological case definition, age, gender or disease outcome. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines more robust and reliable.

Authors:Hugo Gruson [aut, cre], Thibaut Jombart [aut, ccp], Tim Taylor [ctb], Chris Hartgerink [rev]

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linelist.pdf |linelist.html
linelist/json (API)
NEWS

# Install 'linelist' in R:
install.packages('linelist', repos = c('https://bisaloo.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/epiverse-trace/linelist/issues

On CRAN:

datadata-structuresepidemiologyepiverseoutbreakssdg-3structured-data

14 exports 8 stars 8.64 score 18 dependencies 1 dependents 61 scripts 624 downloads

Last updated 3 months agofrom:9e49d07184. Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKSep 08 2024
R-4.5-winOKSep 08 2024
R-4.5-linuxOKSep 08 2024
R-4.4-winOKSep 08 2024
R-4.4-macOKSep 08 2024
R-4.3-winOKSep 08 2024
R-4.3-macOKSep 08 2024

Exports:get_lost_tags_actionhas_taglost_tags_actionmake_linelistselect_tagsset_tagstagstags_defaultstags_dftags_namestags_typesvalidate_linelistvalidate_tagsvalidate_types

Dependencies:backportscheckmateclidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr

An introduction to linelist

Rendered fromlinelist.Rmdusingknitr::rmarkdownon Sep 08 2024.

Last update: 2024-07-04
Started: 2022-09-06

Compatibility with dplyr

Rendered fromcompat-dplyr.Rmdusingknitr::rmarkdownon Sep 08 2024.

Last update: 2024-07-10
Started: 2023-06-19

Design Principles for linelist

Rendered fromdesign-principles.Rmdusingknitr::rmarkdownon Sep 08 2024.

Last update: 2024-07-04
Started: 2024-02-28

Software permissions and regulations

Rendered fromsoftware-permissions.Rmdusingknitr::rmarkdownon Sep 08 2024.

Last update: 2024-03-19
Started: 2024-03-19